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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
15
total RNA-seq
2
ATAC-seq
Assay category
30
DNA binding
15
Transcription
2
DNA accessibility
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
525
February, 2021
334
November, 2017
260
May, 2020
260
May, 2021
206
June, 2019
199
October, 2019
113
August, 2017
96
May, 2019
81
July, 2019
73
November, 2018
72
December, 2017
65
April, 2019
47
August, 2021
40
May, 2024
31
February, 2018
30
December, 2018
26
January, 2019
20
May, 2022
11
July, 2018
10
April, 2018
10
March, 2020
9
October, 2017
8
January, 2018
5
December, 2019
5
November, 2020
5
October, 2018
3
February, 2023
2
June, 2018
Available data
122
tsv
106
bed narrowPeak
64
xls
57
txt
49
bam
47
bigWig
24
tagAlign
5
bed bed3+
2
hic
1
bedpe bed3+
1
vcf
Organism
47
Homo sapiens
Biosample type
22
cell line
22
in vitro differentiated cells
3
primary cell
Organ
17
liver
8
embryo
3
epithelium
2
connective tissue
Project
47
AMP
Genome assembly (visualization)
46
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
organ_slims!
pancreas
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
cell line
HepG2
14
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
primary cell
hepatocyte
3
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