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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
single cell RNA-seq
Assay category
4
DNA binding
2
Transcription
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
Date released
4
December, 2017
1
July, 2018
1
June, 2018
Available data
158
bam
139
bigWig
111
tsv
85
txt
49
bed narrowPeak
24
bigBed narrowPeak
6
bed bed3+
6
bedpe bed3+
6
fastq
4
bed broadPeak
4
bigBed broadPeak
4
hic
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
primary cell
Organ
5
epithelium
pancreas
4
embryo
Project
6
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
6
AMP-T2D consortium
Audit category:
28
inconsistent control
27
audit script error
6
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
pancreas
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
single cell RNA-seq
in vitro differentiated cells
Hepatic endoderm
4
primary cell
unclassified exocrine cell
2
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