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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ATAC-seq
2
pCHi-C
Assay category
64
DNA accessibility
Date released
64
August, 2021
2
March, 2020
Available data
2703
bam
2546
bigWig
1603
bed narrowPeak
tsv
951
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
66
Homo sapiens
Biosample type
64
tissue
2
in vitro differentiated cells
Organ
64
kidney
Project
66
AMP
Genome assembly (visualization)
64
GRCh38
2
hg19
Lab
64
Katalin Susztak, Upenn
2
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
pancreas
files.file_type!
tsv
BIOSAMPLE
ASSAY
66 results
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ATAC-seq
pCHi-C
tissue
kidney
64
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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