Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
Assay category
76
DNA accessibility
Date released
64
August, 2021
10
February, 2023
2
February, 2021
Available data
2673
bam
2520
bigWig
1582
bed narrowPeak
1178
tsv
930
bigBed narrowPeak
857
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
76
Homo sapiens
Biosample type
69
tissue
5
in vitro differentiated cells
1
cell line
1
primary cell
Organ
64
kidney
6
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
76
AMP
Genome assembly (visualization)
66
GRCh38
12
hg19
Lab
64
Katalin Susztak, Upenn
12
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
pancreas
month_released!
January, 2019
BIOSAMPLE
ASSAY
76 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
tissue
kidney
64
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
See all biosamples
Download