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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
DNase-seq
15
ChIP-seq
Assay category
167
DNA accessibility
15
DNA binding
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
153
June, 2019
November, 2017
15
August, 2017
8
October, 2019
5
November, 2018
1
November, 2020
Available data
2146
bam
2056
bigWig
1157
tsv
1151
bed narrowPeak
575
bigBed narrowPeak
551
fastq
249
tagAlign
209
bed bed3+
196
bed broadPeak
182
bigBed broadPeak
155
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
16
bedpe bed3+
16
hic
11
bed bed3
8
csv
7
bed bedgraph
2
ibed
1
hdf5
1
tar
1
vcf
Organism
182
Homo sapiens
Biosample type
143
tissue
38
primary cell
1
in vitro differentiated cells
Organ
78
kidney
36
limb
33
musculature of body
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
9
connective tissue
pancreas
5
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
182
AMP
Genome assembly (visualization)
178
GRCh38
171
hg19
Lab
182
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
pancreas
brain
month_released!
November, 2017
BIOSAMPLE
ASSAY
182 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
renal cortex interstitium
11
+ See 24 more…
primary cell
skeletal muscle myoblast
1
13
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 13 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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