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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
histone
27
histone modification
27
narrow histone mark
23
control
Date released
683
February, 2021
318
November, 2017
314
May, 2020
295
August, 2021
200
May, 2021
195
June, 2019
149
February, 2023
October, 2019
102
July, 2019
96
May, 2022
91
August, 2017
81
November, 2018
63
December, 2017
50
March, 2020
47
September, 2023
40
September, 2020
35
December, 2018
27
May, 2019
24
February, 2020
23
February, 2018
23
January, 2019
23
October, 2018
20
April, 2019
19
April, 2020
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
6
October, 2017
5
March, 2023
5
May, 2024
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
256
bam
233
bigWig
189
tsv
23
tagAlign
Organism
314
Homo sapiens
Biosample type
166
tissue
147
primary cell
1
cell line
Organ
167
liver
Project
269
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
269
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
organ_slims!
pancreas
month_released!
October, 2019
target.investigated_as!
histone
BIOSAMPLE
ASSAY
314 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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