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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
ChIP-seq
9
WGBS
6
RRBS
4
DNase-seq
2
ATAC-seq
Assay category
202
DNA binding
Target of assay
133
histone modification
132
histone
77
broad histone mark
54
narrow histone mark
40
transcription factor
29
control
6
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
229
October, 2019
202
August, 2017
161
May, 2021
118
May, 2019
94
December, 2017
80
April, 2019
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
23
October, 2018
15
October, 2017
8
February, 2021
Available data
107
bam
107
fastq
106
bigWig
88
bed narrowPeak
69
tagAlign
27
bed broadPeak
20
bigBed narrowPeak
14
bed bed3+
13
bigBed broadPeak
Organism
202
Homo sapiens
Biosample type
120
tissue
67
in vitro differentiated cells
15
primary cell
Organ
117
connective tissue
pancreas
50
adipose tissue
48
liver
26
epithelium
22
musculature of body
Project
202
AMP
Genome assembly (visualization)
108
hg19
92
GRCh38
Lab
202
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
8
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
202 results
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Clear Filters
ChIP-seq
tissue
liver
48
subcutaneous abdominal adipose tissue
36
skeletal muscle tissue
22
white adipose tissue
12
adipose tissue
2
in vitro differentiated cells
adipocyte
67
primary cell
skeletal muscle myoblast
15
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