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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
6
WGBS
5
RRBS
3
DNase-seq
1
ATAC-seq
Assay category
154
DNA binding
11
DNA methylation
4
DNA accessibility
Target of assay
100
histone
100
histone modification
58
broad histone mark
41
narrow histone mark
36
transcription factor
18
control
6
RNA binding protein
3
chromatin remodeller
Date released
641
February, 2021
289
October, 2019
280
August, 2021
212
June, 2019
186
May, 2021
169
August, 2017
118
May, 2019
105
February, 2023
102
May, 2020
92
July, 2019
91
November, 2017
80
April, 2019
47
March, 2020
40
May, 2024
39
February, 2018
34
December, 2018
31
December, 2017
28
November, 2018
25
January, 2019
23
February, 2020
23
October, 2018
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
8
January, 2018
6
November, 2019
6
November, 2020
5
December, 2019
2
June, 2018
2
May, 2022
1
August, 2018
1
October, 2022
1
September, 2018
Available data
95
bigWig
91
fastq
88
bam
75
bed narrowPeak
49
tagAlign
29
bed broadPeak
19
bigBed narrowPeak
15
bigBed broadPeak
11
bed bed3+
5
bed bedMethyl
5
bigBed bedMethyl
Organism
169
Homo sapiens
Biosample type
83
tissue
68
in vitro differentiated cells
18
primary cell
Organ
pancreas
125
connective tissue
57
adipose tissue
liver
29
epithelium
26
musculature of body
Project
169
AMP
Genome assembly (visualization)
97
hg19
78
GRCh38
Lab
169
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
7
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
organ_slims!
pancreas
liver
BIOSAMPLE
ASSAY
169 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
ATAC-seq
tissue
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
white adipose tissue
12
adipose tissue
2
3
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
67
1
primary cell
skeletal muscle myoblast
15
1
2
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