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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
ChIP-seq
9
WGBS
6
RRBS
1
DNase-seq
Assay category
124
DNA binding
15
DNA methylation
1
DNA accessibility
Target of assay
66
histone modification
65
histone
38
transcription factor
36
broad histone mark
28
narrow histone mark
20
control
4
RNA binding protein
2
chromatin remodeller
Date released
675
February, 2021
291
August, 2021
291
May, 2020
251
May, 2021
184
October, 2019
149
February, 2023
140
August, 2017
100
July, 2019
96
May, 2022
70
November, 2017
50
March, 2020
47
September, 2023
44
December, 2017
40
May, 2024
40
September, 2020
39
February, 2018
24
February, 2020
22
May, 2019
19
April, 2020
18
October, 2018
16
April, 2019
15
May, 2023
11
July, 2018
11
November, 2018
10
April, 2018
10
December, 2019
9
January, 2019
8
January, 2018
8
January, 2021
8
June, 2019
6
November, 2019
5
December, 2018
5
March, 2023
5
November, 2020
4
October, 2017
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
119
fastq
114
bam
113
bigWig
93
bed narrowPeak
tagAlign
29
bed broadPeak
bigBed narrowPeak
15
bigBed broadPeak
14
bed bed3+
6
bed bedMethyl
6
bigBed bedMethyl
Organism
140
Homo sapiens
Biosample type
86
tissue
53
in vitro differentiated cells
1
primary cell
Organ
pancreas
100
connective tissue
47
adipose tissue
28
liver
26
epithelium
11
musculature of body
Project
140
AMP
Genome assembly (visualization)
77
hg19
75
GRCh38
Lab
140
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
organ_slims!
pancreas
files.file_type!
bigBed narrowPeak
tagAlign
BIOSAMPLE
ASSAY
140 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
tissue
subcutaneous abdominal adipose tissue
28
3
liver
23
3
1
white adipose tissue
12
skeletal muscle tissue
7
4
adipose tissue
1
3
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in vitro differentiated cells
adipocyte
53
primary cell
skeletal muscle myoblast
1
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