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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
7
WGBS
6
RRBS
3
single cell RNA-seq
2
RNA microarray
1
DNase-seq
Assay category
96
DNA binding
13
DNA methylation
3
Transcription
1
DNA accessibility
Target of assay
68
histone
68
histone modification
44
broad histone mark
28
control
24
narrow histone mark
Date released
268
August, 2021
158
February, 2021
146
February, 2023
110
August, 2017
97
October, 2019
81
May, 2020
78
May, 2021
76
May, 2022
72
November, 2017
47
September, 2023
40
March, 2020
40
September, 2020
24
February, 2020
22
December, 2017
22
May, 2019
21
July, 2019
19
April, 2020
18
October, 2018
15
April, 2019
15
May, 2023
9
October, 2017
8
February, 2018
8
January, 2021
8
June, 2019
8
November, 2018
6
November, 2019
5
December, 2018
5
December, 2019
5
March, 2023
4
January, 2019
1
August, 2018
1
November, 2020
1
October, 2022
1
September, 2018
Available data
119
bam
119
fastq
bigWig
93
bed narrowPeak
69
tagAlign
29
bed broadPeak
25
bigBed narrowPeak
15
bigBed broadPeak
14
bed bed3+
9
tsv
6
bed bedMethyl
6
bigBed bedMethyl
Organism
115
Homo sapiens
Biosample type
92
tissue
22
in vitro differentiated cells
1
primary cell
Organ
60
connective tissue
40
adipose tissue
36
liver
pancreas
13
epithelium
13
musculature of body
3
kidney
Project
115
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
115
AMP-T2D consortium
Audit category:
4
audit script error
2
inconsistent ontology term
organ_slims!
pancreas
files.file_type!
bigWig
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
WGBS
RRBS
single cell RNA-seq
RNA microarray
DNase-seq
tissue
subcutaneous abdominal adipose tissue
35
3
liver
31
3
1
skeletal muscle tissue
9
4
adipose tissue
1
1
kidney
1
+ See 3 more…
in vitro differentiated cells
adipocyte
20
cardiomyocytes (cardiac muscle cell)
2
primary cell
skeletal muscle myoblast
1
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