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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
85
ChIP-seq
6
RRBS
3
DNase-seq
3
WGBS
1
ATAC-seq
Assay category
85
DNA binding
9
DNA methylation
4
DNA accessibility
Target of assay
64
histone modification
63
histone
37
broad histone mark
26
narrow histone mark
15
control
6
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
406
November, 2017
341
May, 2020
336
May, 2021
310
August, 2021
292
October, 2019
228
February, 2021
196
June, 2019
135
February, 2023
118
May, 2019
98
August, 2017
May, 2022
94
December, 2017
84
July, 2019
80
April, 2019
80
November, 2018
48
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
22
February, 2020
19
April, 2020
17
October, 2017
14
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2021
7
January, 2018
5
March, 2023
5
November, 2019
2
June, 2018
1
October, 2022
1
September, 2018
Available data
48
bigWig
47
bed narrowPeak
47
fastq
47
tagAlign
43
bam
27
bed broadPeak
22
bigBed narrowPeak
14
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
bed bed3+
Organism
98
Homo sapiens
Biosample type
80
tissue
18
primary cell
Organ
pancreas
connective tissue
57
adipose tissue
54
liver
29
epithelium
26
musculature of body
Project
98
AMP
Genome assembly (visualization)
53
hg19
32
GRCh38
Lab
98
AMP-T2D consortium
Audit category:
2
inconsistent assembly
2
inconsistent control read length
1
inconsistent control run_type
organ_slims!
pancreas
connective tissue
month_released!
May, 2022
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
RRBS
DNase-seq
WGBS
ATAC-seq
tissue
liver
48
1
3
skeletal muscle tissue
22
4
right lobe of liver
1
1
primary cell
skeletal muscle myoblast
15
1
2
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