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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
15
total RNA-seq
1
Hi-C
Assay category
58
DNA binding
15
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
16
histone
16
histone modification
12
control
8
broad histone mark
8
narrow histone mark
2
RNA binding protein
2
chromatin remodeller
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
74
fastq
73
bam
61
bigWig
46
bed narrowPeak
30
bigBed narrowPeak
15
tsv
Organism
74
Homo sapiens
Biosample type
39
in vitro differentiated cells
28
cell line
7
tissue
Organ
27
blood
27
bodily fluid
13
embryo
7
spleen
1
liver
Project
74
AMP
Genome assembly (visualization)
61
GRCh38
61
hg19
Lab
74
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
2
inconsistent control read length
organ_slims!
pancreas
month_released!
March, 2020
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
cell line
GM12878
27
HepG2
1
tissue
spleen
7
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