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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
11
ATAC-seq
3
single cell RNA-seq
1
Hi-C
1
total RNA-seq
Assay category
34
DNA binding
11
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
35
fastq
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
Organism
50
Homo sapiens
Biosample type
28
cell line
22
tissue
Organ
27
blood
27
bodily fluid
14
kidney
7
spleen
1
adipose tissue
1
connective tissue
1
liver
Project
50
AMP
Genome assembly (visualization)
42
GRCh38
31
hg19
Lab
36
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
1
inconsistent control
organ_slims!
pancreas
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
Hi-C
total RNA-seq
cell line
GM12878
27
HepG2
1
tissue
kidney
11
3
spleen
7
adipose tissue
1
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