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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
31
ChIP-seq
5
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
183
DNA accessibility
31
DNA binding
8
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
219
bam
211
bigWig
206
bed narrowPeak
206
bigBed narrowPeak
183
bed bed3+
183
bed broadPeak
183
bigBed broadPeak
9
tsv
Organism
224
Homo sapiens
Biosample type
162
tissue
60
primary cell
2
in vitro differentiated cells
Organ
84
kidney
43
musculature of body
35
heart
32
limb
30
brain
26
epithelium
18
connective tissue
18
ureter
7
eye
7
liver
7
vasculature
5
blood vessel
pancreas
2
artery
1
adipose tissue
Project
224
AMP
Genome assembly (visualization)
211
GRCh38
190
hg19
Lab
224
AMP-T2D consortium
Audit category:
28
inconsistent ontology term
4
audit script error
organ_slims!
pancreas
BIOSAMPLE
ASSAY
224 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
tissue
heart
18
muscle of arm
17
kidney
13
1
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
hepatocyte
1
5
cardiac muscle cell
1
3
+ See 17 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
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