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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
single cell RNA-seq
25
total RNA-seq
22
snATAC-seq
20
ATAC-seq
2
RNA microarray
Assay category
62
Transcription
42
DNA accessibility
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
54
zippedFastqFolder
25
bigWig
20
bed narrowPeak
9
tsv
5
bam
1
bed bed3+
1
txt
Organism
106
Homo sapiens
Biosample type
59
primary cell
45
tissue
2
in vitro differentiated cells
Organ
pancreas
86
epithelium
45
liver
3
kidney
2
musculature of body
Project
54
HPAP
52
AMP
Genome assembly (visualization)
26
hg19
5
GRCh38
Lab
54
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
12
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
organ_slims!
pancreas
month_released!
October, 2017
BIOSAMPLE
ASSAY
106 results
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Clear Filters
single cell RNA-seq
total RNA-seq
snATAC-seq
ATAC-seq
RNA microarray
primary cell
Langerhans cell
33
21
hepatocyte
5
tissue
liver
20
20
skeletal muscle tissue
1
1
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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