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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
324
ChIP-seq
Assay category
324
DNA binding
Target of assay
244
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
18
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
324
November, 2017
119
August, 2017
94
December, 2017
81
November, 2018
39
February, 2018
39
February, 2021
39
February, 2023
35
December, 2018
30
January, 2019
23
October, 2018
22
September, 2020
12
October, 2017
11
July, 2018
10
April, 2018
5
January, 2018
2
June, 2018
1
August, 2018
1
September, 2018
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
324
Homo sapiens
Biosample type
315
cell line
9
primary cell
Organ
315
liver
9
brain
6
epithelium
6
vasculature
3
blood vessel
Project
324
AMP
Genome assembly (visualization)
275
hg19
223
GRCh38
Lab
324
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
324 results
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ChIP-seq
cell line
HepG2
315
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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