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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
260
ChIP-seq
Assay category
260
DNA binding
Target of assay
197
transcription factor
66
recombinant protein
59
control
30
RNA binding protein
11
chromatin remodeller
1
histone
1
histone modification
1
narrow histone mark
1
other context
1
other post-translational modification
Date released
260
November, 2017
104
August, 2017
94
December, 2017
74
November, 2018
39
February, 2018
39
February, 2021
39
February, 2023
35
December, 2018
30
January, 2019
23
October, 2018
22
September, 2020
12
October, 2017
11
July, 2018
10
April, 2018
5
January, 2018
2
June, 2018
1
August, 2018
1
September, 2018
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
bigBed broadPeak
3
tar
Organism
260
Homo sapiens
Biosample type
257
cell line
3
primary cell
Organ
257
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
260
AMP
Genome assembly (visualization)
211
hg19
173
GRCh38
Lab
260
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
260 results
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Clear Filters
ChIP-seq
cell line
HepG2
257
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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