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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
437
ChIP-seq
183
DNase-seq
Assay category
437
DNA binding
183
DNA accessibility
Target of assay
248
transcription factor
107
histone
107
histone modification
79
control
66
recombinant protein
58
broad histone mark
49
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
606
bam
540
bigWig
519
bed narrowPeak
518
bigBed narrowPeak
324
fastq
253
bed broadPeak
247
bigBed broadPeak
183
bed bed3+
78
tagAlign
3
tar
Organism
620
Homo sapiens
Biosample type
315
cell line
241
tissue
64
primary cell
Organ
317
liver
121
brain
81
kidney
43
musculature of body
35
heart
32
limb
26
epithelium
18
connective tissue
18
ureter
13
vasculature
8
blood vessel
7
eye
pancreas
2
artery
1
adipose tissue
Project
620
AMP
Genome assembly (visualization)
486
GRCh38
466
hg19
Lab
620
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
620 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
heart
18
muscle of arm
17
caudate nucleus
15
1
substantia nigra
15
+ See 36 more…
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
+ See 17 more…
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