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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
304
ChIP-seq
162
DNase-seq
Assay category
304
DNA binding
162
DNA accessibility
Target of assay
242
transcription factor
65
recombinant protein
43
histone
43
histone modification
38
RNA binding protein
25
narrow histone mark
18
broad histone mark
16
control
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
548
February, 2021
281
November, 2017
273
May, 2021
260
May, 2020
209
October, 2019
185
June, 2019
117
August, 2017
96
May, 2019
85
July, 2019
77
December, 2017
68
November, 2018
65
April, 2019
60
August, 2021
45
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
21
March, 2020
21
May, 2022
11
July, 2018
10
April, 2018
8
October, 2017
6
November, 2019
6
November, 2020
5
December, 2019
5
October, 2018
3
January, 2018
2
June, 2018
1
May, 2023
Available data
466
bigWig
465
bam
444
bed narrowPeak
443
bigBed narrowPeak
275
fastq
232
bed broadPeak
226
bigBed broadPeak
162
bed bed3+
18
tagAlign
3
tar
Organism
466
Homo sapiens
Biosample type
266
cell line
151
tissue
49
primary cell
Organ
268
liver
73
kidney
41
musculature of body
35
brain
32
limb
30
heart
18
epithelium
18
ureter
14
connective tissue
12
vasculature
7
blood vessel
6
eye
2
artery
pancreas
1
adipose tissue
Project
466
AMP
Genome assembly (visualization)
486
GRCh38
466
hg19
Lab
466
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
466 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
266
tissue
muscle of arm
17
heart
16
kidney
13
muscle of leg
13
brain
12
+ See 25 more…
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
2
astrocyte of the cerebellum
3
1
brain microvascular endothelial cell
3
1
+ See 13 more…
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