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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
356
ChIP-seq
Assay category
356
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
356
November, 2017
341
May, 2020
306
August, 2021
262
May, 2021
245
October, 2019
206
June, 2019
149
February, 2023
146
August, 2017
102
July, 2019
96
May, 2022
81
November, 2018
79
December, 2017
60
May, 2019
50
March, 2020
47
September, 2023
43
April, 2019
40
September, 2020
35
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
23
October, 2018
20
May, 2024
19
April, 2020
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
8
October, 2017
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
346
bam
316
fastq
289
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
356
Homo sapiens
Biosample type
307
cell line
40
tissue
9
primary cell
Organ
307
liver
49
brain
6
epithelium
6
vasculature
3
blood vessel
Project
356
AMP
Genome assembly (visualization)
271
hg19
235
GRCh38
Lab
356
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
356 results
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Clear Filters
ChIP-seq
cell line
HepG2
307
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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