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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
16
ATAC-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
19
DNA accessibility
17
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
17
February, 2023
3
June, 2019
1
February, 2020
Available data
18
bed narrowPeak
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
3
tsv
Organism
42
Homo sapiens
Biosample type
42
tissue
Organ
pancreas
791
liver
684
connective tissue
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
42
AMP
Genome assembly (visualization)
18
hg19
3
GRCh38
Lab
42
AMP-T2D consortium
organ_slims!
pancreas
epithelium
BIOSAMPLE
ASSAY
42 results
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Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
14
1
4
2
retina
3
15
3
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