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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
Assay category
45
DNA binding
Target of assay
45
histone
45
histone modification
23
narrow histone mark
22
broad histone mark
12
control
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
21
October, 2019
14
December, 2017
3
August, 2021
3
May, 2019
2
June, 2019
2
November, 2017
Available data
45
bam
42
bigWig
40
bed narrowPeak
29
bigBed narrowPeak
16
fastq
4
bed broadPeak
4
bigBed broadPeak
3
bed bed3+
3
tagAlign
Organism
45
Homo sapiens
Biosample type
31
primary cell
14
in vitro differentiated cells
Organ
187
brain
pancreas
102
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
0
lung
Project
45
AMP
Genome assembly (visualization)
42
hg19
40
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
pancreas
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
15
epithelial cell of proximal tubule
7
hepatocyte
3
kidney epithelial cell
3
brain microvascular endothelial cell
1
+ See 2 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
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