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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ATAC-seq
ChIP-seq
21
DNase-seq
13
WGBS
1
Hi-C
Assay category
133
DNA accessibility
13
DNA methylation
1
3D chromatin structure
Date released
64
August, 2021
35
February, 2023
21
June, 2019
11
May, 2023
9
July, 2019
3
November, 2018
2
August, 2017
1
March, 2023
1
October, 2017
Available data
120
bed narrowPeak
64
xls
36
bam
36
bigWig
21
bed bed3+
21
bed broadPeak
21
bigBed broadPeak
21
bigBed narrowPeak
13
bed bedMethyl
13
bigBed bedMethyl
6
fastq
1
hic
Organism
147
Homo sapiens
Biosample type
138
tissue
8
primary cell
1
cell line
Organ
82
kidney
44
heart
37
blood vessel
37
vasculature
35
artery
16
epithelium
pancreas
12
brain
3
connective tissue
2
adipose tissue
2
spleen
1
limb
1
liver
1
musculature of body
Project
146
AMP
1
ITG
Genome assembly (visualization)
hg19
1380
GRCh38
5
hg18
Lab
75
Katalin Susztak, Upenn
71
AMP-T2D consortium
1
ITG
organ_slims!
pancreas
target.investigated_as!
control
assay_title!
ChIP-seq
assembly!
hg19
BIOSAMPLE
ASSAY
147 results
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ATAC-seq
DNase-seq
WGBS
Hi-C
tissue
kidney
75
coronary artery
35
heart
2
1
adipose tissue
2
heart left ventricle
2
+ See 19 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
chondrocytes
1
kidney capillary endothelial cell
1
+ See 1 more…
cell line
HepG2
1
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