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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
ChIP-seq
8
snATAC-seq
Assay category
162
DNA binding
8
DNA accessibility
Target of assay
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
678
February, 2021
341
May, 2020
323
May, 2021
304
August, 2021
289
October, 2019
210
June, 2019
183
August, 2017
162
November, 2017
149
February, 2023
113
May, 2019
102
July, 2019
96
May, 2022
74
April, 2019
52
December, 2017
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
May, 2024
24
February, 2020
19
April, 2020
18
October, 2017
18
October, 2018
17
November, 2018
16
January, 2019
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
7
December, 2018
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
149
bam
94
bigWig
80
fastq
78
tagAlign
77
bed narrowPeak
76
bigBed narrowPeak
23
bed broadPeak
17
bigBed broadPeak
Organism
170
Homo sapiens
Biosample type
82
tissue
74
cell line
14
primary cell
Organ
88
brain
74
liver
8
blood
8
bodily fluid
pancreas
4
epithelium
4
vasculature
2
blood vessel
Project
162
AMP
8
T1D
Genome assembly (visualization)
76
GRCh38
43
hg19
Lab
162
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
organ_slims!
pancreas
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
170 results
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Clear Filters
ChIP-seq
snATAC-seq
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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cell line
HepG2
74
primary cell
peripheral blood mononuclear cell
8
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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