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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
single cell RNA-seq
Assay category
20
DNA binding
3
Transcription
Target of assay
179
histone
179
histone modification
95
broad histone mark
84
narrow histone mark
23
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
8
June, 2019
3
July, 2019
3
May, 2021
3
November, 2017
3
October, 2019
1
August, 2017
1
August, 2021
1
May, 2019
Available data
20
bam
10
bigWig
4
fastq
3
tsv
2
tagAlign
Organism
23
Homo sapiens
Biosample type
158
tissue
72
cell line
36
in vitro differentiated cells
23
primary cell
1
stem cell
Organ
21
epithelium
pancreas
6
brain
4
vasculature
3
blood vessel
3
connective tissue
3
kidney
2
heart
2
musculature of body
2
vein
1
eye
1
liver
Project
23
AMP
Genome assembly (visualization)
10
hg19
3
GRCh38
Lab
20
AMP-T2D consortium
3
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
single cell RNA-seq
primary cell
CD8-positive, alpha-beta T cell
3
cardiac fibroblast
2
cerebellar granule cell
2
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
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