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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
43
total RNA-seq
18
small RNA-seq
9
WGBS
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
120
DNA binding
64
Transcription
9
DNA methylation
8
DNA accessibility
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
26
control
5
RNA binding protein
5
transcription factor
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
81
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
201
bam
181
bigWig
104
bed narrowPeak
99
bigBed narrowPeak
64
tsv
22
bed bedMethyl
22
bigBed bedMethyl
4
bed bed3+
4
hdf5
Organism
201
Homo sapiens
Biosample type
179
tissue
22
primary cell
Organ
59
blood vessel
59
vasculature
42
heart
41
brain
16
connective tissue
12
adipose tissue
12
kidney
12
musculature of body
10
epithelium
8
artery
8
limb
7
liver
6
pancreas
pericardium
Project
201
AMP
Genome assembly (visualization)
174
GRCh38
168
hg19
Lab
201
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
pericardium
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
thoracic aorta
16
2
1
ascending aorta
16
1
temporal lobe
15
1
1
aorta
13
2
angular gyrus
13
+ See 23 more…
primary cell
kidney epithelial cell
5
1
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
+ See 9 more…
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