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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
469
total RNA-seq
352
ChIP-seq
199
ATAC-seq
173
single cell RNA-seq
59
WGBS
38
DNase-seq
12
Hi-C
11
snATAC-seq
10
MeRIP-seq
4
RRBS
4
pCHi-C
3
small RNA-seq
2
Capture-C
2
FAIRE-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
38
DNA accessibility
Date released
34
June, 2019
2
November, 2018
1
August, 2017
1
October, 2019
Available data
38
bam
38
bed narrowPeak
38
bigBed narrowPeak
38
bigWig
37
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
3
fastq
Organism
38
Homo sapiens
Biosample type
34
tissue
3
primary cell
1
cell line
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
38
AMP
Genome assembly (visualization)
38
GRCh38
33
hg19
Lab
38
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
pericardium
BIOSAMPLE
ASSAY
38 results
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DNase-seq
tissue
heart
18
body of pancreas
4
heart left ventricle
3
coronary artery
2
pancreas
2
+ See 4 more…
primary cell
cardiac fibroblast
3
cell line
Panc1
1
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