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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
469
total RNA-seq
352
ChIP-seq
199
ATAC-seq
173
single cell RNA-seq
59
WGBS
38
DNase-seq
12
Hi-C
11
snATAC-seq
10
MeRIP-seq
4
RRBS
4
pCHi-C
3
small RNA-seq
2
Capture-C
2
FAIRE-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
173
Transcription
Date released
92
August, 2021
39
April, 2018
37
July, 2018
3
August, 2018
1
February, 2023
1
June, 2018
Available data
172
tsv
80
bam
80
bigWig
75
fastq
Organism
173
Homo sapiens
Biosample type
99
tissue
74
primary cell
Organ
93
heart
80
pancreas
70
epithelium
64
kidney
9
lung
6
blood vessel
6
vasculature
4
connective tissue
3
brain
2
artery
1
liver
1
musculature of body
Project
173
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
173
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
pericardium
BIOSAMPLE
ASSAY
173 results
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single cell RNA-seq
tissue
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
islet of Langerhans
6
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primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
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