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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
166
histone
166
histone modification
87
broad histone mark
79
narrow histone mark
55
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
32
August, 2017
19
October, 2018
17
September, 2018
13
October, 2019
6
November, 2019
Available data
80
bigWig
79
bam
73
bed narrowPeak
52
fastq
35
bigBed narrowPeak
10
bed broadPeak
8
tagAlign
6
bed bed3+
2
bigBed broadPeak
Organism
83
Homo sapiens
Biosample type
41
tissue
36
primary cell
10
cell line
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
87
AMP
Genome assembly (visualization)
80
hg19
74
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
organ_slims!
pericardium
BIOSAMPLE
ASSAY
87 results
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ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
8
primary cell
pancreatic endocrine cell
11
endothelial cell of umbilical vein
9
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
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cell line
EndoC_BH1
6
Panc1
4
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