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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
154
histone
154
histone modification
78
broad histone mark
76
narrow histone mark
54
control
20
transcription factor
10
RNA binding protein
5
nucleotide modification
Date released
10
October, 2018
7
August, 2017
1
June, 2019
1
May, 2021
1
November, 2019
Available data
20
bam
20
bigWig
17
fastq
14
bed narrowPeak
11
bigBed narrowPeak
7
bed bed3+
1
tagAlign
Organism
20
Homo sapiens
Biosample type
17
tissue
1
cell line
1
in vitro differentiated cells
1
primary cell
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
20
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
20
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
6
missing controlled_by
organ_slims!
pericardium
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
9
islet of Langerhans
7
pancreas
1
cell line
EndoC_BH1
1
in vitro differentiated cells
pancreatic PP cell
1
primary cell
retinal pigment epithelial cell
1
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