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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
4
Hi-C
3
single cell RNA-seq
2
FAIRE-seq
Assay category
64
Transcription
8
DNA accessibility
8
DNA methylation
4
3D chromatin structure
Target of assay
3
control
Date released
551
February, 2021
332
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
84
July, 2019
77
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
84
bigWig
81
bam
64
tsv
22
bed bedMethyl
22
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
84
Homo sapiens
Biosample type
63
tissue
21
primary cell
Organ
21
heart
17
connective tissue
16
brain
12
adipose tissue
10
blood vessel
10
vasculature
8
liver
7
epithelium
7
kidney
5
musculature of body
4
pancreas
3
artery
1
limb
pericardium
Project
84
AMP
Genome assembly (visualization)
78
GRCh38
75
hg19
Lab
84
AMP-T2D consortium
organ_slims!
pericardium
target.investigated_as!
other context
BIOSAMPLE
ASSAY
84 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
Hi-C
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
+ See 13 more…
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