Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
5
GRO-seq
4
total RNA-seq
3
ATAC-seq
Assay category
4
Transcription
3
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
124
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
13
bigWig
6
bam
5
fastq
4
tsv
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
22
Homo sapiens
Biosample type
7
cell line
6
tissue
4
in vitro differentiated cells
4
primary cell
1
stem cell
Organ
10
pancreas
6
epithelium
5
connective tissue
1
adipose tissue
1
blood
1
bodily fluid
1
embryo
1
musculature of body
Project
22
AMP
Genome assembly (visualization)
7
hg19
5
hg18
4
GRCh38
Lab
12
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
organ_slims!
pituitary gland
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
22 results
search-icon
table-tab-icon
Clear Filters
MeRIP-seq
GRO-seq
total RNA-seq
ATAC-seq
cell line
EndoC_BH1
6
GM12878
1
tissue
islet of Langerhans
4
adipose tissue
1
skeletal muscle tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
osteoblast
4
stem cell
hESC
1
Download