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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
Assay category
293
DNA binding
Target of assay
226
transcription factor
65
recombinant protein
64
histone
64
histone modification
40
broad histone mark
30
RNA binding protein
24
narrow histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
293
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
68
November, 2018
64
April, 2019
50
December, 2017
44
October, 2018
36
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
293
Homo sapiens
Biosample type
230
cell line
57
tissue
6
primary cell
Organ
230
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
293
AMP
Genome assembly (visualization)
263
GRCh38
239
hg19
Lab
293
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pituitary gland
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
293 results
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Clear Filters
ChIP-seq
cell line
HepG2
230
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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