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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
116
total RNA-seq
48
single cell RNA-seq
23
ChIP-seq
Assay category
187
DNA accessibility
164
Transcription
23
DNA binding
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
4
RNA binding protein
4
transcription factor
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
206
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
382
bam
374
bigWig
210
bed narrowPeak
210
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
164
tsv
50
fastq
Organism
374
Homo sapiens
Biosample type
279
tissue
95
primary cell
Organ
157
pancreas
80
kidney
51
epithelium
41
musculature of body
33
heart
32
limb
30
brain
18
ureter
17
connective tissue
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
374
AMP
Genome assembly (visualization)
374
GRCh38
351
hg19
Lab
374
AMP-T2D consortium
Audit category:
28
inconsistent ontology term
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
374 results
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Clear Filters
DNase-seq
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
116
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 35 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
+ See 32 more…
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