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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
142
total RNA-seq
48
single cell RNA-seq
32
ChIP-seq
14
ATAC-seq
Assay category
190
Transcription
32
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
206
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
40
May, 2024
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
236
bam
236
bigWig
190
tsv
123
fastq
46
bed narrowPeak
14
bigBed narrowPeak
1
csv
Organism
236
Homo sapiens
Biosample type
120
primary cell
116
tissue
Organ
225
pancreas
94
epithelium
2
connective tissue
Project
236
AMP
Genome assembly (visualization)
236
GRCh38
236
hg19
Lab
236
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
32
missing controlled_by
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
236 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
primary cell
pancreatic ductal cell
4
3
13
4
pancreatic beta cell
10
9
4
pancreatic alpha cell
10
7
3
pancreatic acinar cell
2
5
8
3
pancreatic endocrine cell
11
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tissue
islet of Langerhans
116
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