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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
10
total RNA-seq
1
GRO-seq
Assay category
13
DNA binding
10
Transcription
Target of assay
6
histone
6
histone modification
5
narrow histone mark
4
control
3
transcription factor
1
broad histone mark
Date released
13
December, 2017
February, 2018
8
August, 2021
2
May, 2021
1
January, 2018
Available data
23
bam
19
bigWig
14
fastq
10
tsv
8
bed narrowPeak
3
bed bed3+
Organism
24
Homo sapiens
Biosample type
16
in vitro differentiated cells
8
cell line
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
25
spleen
24
embryo
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
1
hg18
Lab
24
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
3
inconsistent control read length
organ_slims!
pituitary gland
month_released!
February, 2018
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
9
1
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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