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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
29
ATAC-seq
19
total RNA-seq
8
snATAC-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
65
DNA binding
Target of assay
52
transcription factor
11
RNA binding protein
10
chromatin remodeller
7
control
4
histone
4
histone modification
4
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
3
June, 2019
2
October, 2019
Available data
63
bam
60
fastq
56
bed narrowPeak
56
bigBed narrowPeak
56
bigWig
Organism
65
Homo sapiens
Biosample type
60
cell line
3
primary cell
2
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
pituitary gland
Project
65
AMP
Genome assembly (visualization)
56
GRCh38
56
hg19
Lab
65
AMP-T2D consortium
Audit category:
1
inconsistent control
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
cell line
GM12878
60
primary cell
retinal pigment epithelial cell
3
tissue
islet of Langerhans
2
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