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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
36
DNase-seq
4
ATAC-seq
Assay category
76
DNA binding
40
DNA accessibility
Target of assay
63
histone
63
histone modification
38
broad histone mark
25
narrow histone mark
13
transcription factor
11
RNA binding protein
Date released
46
April, 2019
42
June, 2019
15
May, 2019
5
October, 2018
3
August, 2017
3
October, 2019
1
November, 2018
1
November, 2020
Available data
793
bam
785
bigWig
643
tsv
260
bed narrowPeak
116
bigBed narrowPeak
101
fastq
54
bed bed3+
37
bed broadPeak
36
bigBed broadPeak
28
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
6
bed bed3
4
bed bedgraph
4
bedpe bed3+
3
hic
1
hdf5
Organism
116
Homo sapiens
Biosample type
98
tissue
15
primary cell
3
in vitro differentiated cells
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
116
AMP
Genome assembly (visualization)
113
GRCh38
113
hg19
Lab
116
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
116 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
heart left ventricle
28
3
heart
7
18
heart right ventricle
11
1
right atrium auricular region
7
2
coronary artery
3
2
+ See 5 more…
primary cell
cardiac fibroblast
3
3
mesenchymal stem cell
6
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
2
See all biosamples
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