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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
Assay category
8
DNA accessibility
Date released
6
February, 2023
2
February, 2021
Available data
3175
bam
2920
bigWig
1600
tsv
1560
bed narrowPeak
1346
fastq
833
bigBed narrowPeak
398
tagAlign
157
txt
153
zippedFastqFolder
116
bed broadPeak
79
bigBed broadPeak
69
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
8
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
cell line
1
primary cell
1
tissue
Organ
6
connective tissue
4
bone element
skeleton
1
brain
1
liver
Project
8
AMP
Genome assembly (visualization)
8
hg19
2
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent replicate
organ_slims!
skeleton
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
8 results
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Clear Filters
ATAC-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
tissue
brain
1
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