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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
4
WGBS
3
ATAC-seq
pCHi-C
2
total RNA-seq
1
RNA microarray
Assay category
55
DNA binding
4
DNA methylation
3
DNA accessibility
2
Transcription
Target of assay
31
histone
31
histone modification
24
control
20
broad histone mark
11
narrow histone mark
Date released
41
August, 2017
18
October, 2018
2
February, 2020
1
August, 2021
1
February, 2023
1
January, 2018
1
October, 2019
Available data
20
fastq
19
bam
8
tagAlign
3
bigWig
2
bed narrowPeak
2
tsv
1
bed broadPeak
1
bigBed narrowPeak
Organism
64
Homo sapiens
Biosample type
65
tissue
Organ
310
pancreas
257
liver
230
epithelium
147
kidney
124
heart
113
connective tissue
92
bone element
67
brain
65
adipose tissue
51
eye
44
vasculature
42
blood vessel
42
musculature of body
26
limb
19
lung
15
blood
15
bodily fluid
13
artery
12
nerve
10
vein
8
embryo
skeleton
8
spleen
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
65
AMP
Genome assembly (visualization)
426
hg19
GRCh38
Lab
65
AMP-T2D consortium
organ_slims!
skeleton
assay_title!
pCHi-C
assembly!
GRCh38
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
WGBS
ATAC-seq
total RNA-seq
RNA microarray
tissue
subcutaneous abdominal adipose tissue
36
3
subcutaneous adipose tissue
10
1
1
omental fat pad
8
1
adipose tissue
1
1
3
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