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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
WGBS
Assay category
19
DNA methylation
Date released
15
July, 2019
4
August, 2017
Available data
3366
bam
3152
bigWig
1809
bed narrowPeak
1594
tsv
1341
fastq
1042
bigBed narrowPeak
398
tagAlign
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
157
txt
112
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
19
bed bedMethyl
19
bigBed bedMethyl
8
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
19
Homo sapiens
Biosample type
10
primary cell
9
tissue
Organ
6
epithelium
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
19
AMP
Genome assembly (visualization)
19
hg19
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
skeleton
files.file_type!
bed broadPeak
assay_title!
WGBS
BIOSAMPLE
ASSAY
19 results
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RRBS
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
See all biosamples
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