Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
DNase-seq
8
single cell RNA-seq
1
ATAC-seq
Assay category
24
DNA accessibility
8
Transcription
Date released
23
June, 2019
6
February, 2021
1
March, 2019
1
November, 2018
1
September, 2018
Available data
394
bam
350
fastq
219
bed narrowPeak
198
tsv
160
tagAlign
153
bigWig
153
txt
153
zippedFastqFolder
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
32
Homo sapiens
Biosample type
23
tissue
9
primary cell
Organ
12
kidney
10
brain
6
epithelium
3
heart
3
pancreas
1
blood vessel
1
connective tissue
1
liver
1
vasculature
Project
32
AMP
Genome assembly (visualization)
hg19
282
GRCh38
Lab
31
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
5
audit script error
organ_slims!
skeleton
assembly!
hg19
BIOSAMPLE
ASSAY
32 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
single cell RNA-seq
ATAC-seq
tissue
kidney
5
body of pancreas
2
heart
2
Ammon's horn
1
caudate nucleus
1
+ See 12 more…
primary cell
glomerular visceral epithelial cell
2
kidney tubule cell
2
pancreatic cell
2
cardiac fibroblast
1
kidney capillary endothelial cell
1
+ See 1 more…
See all biosamples
Download