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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
Assay category
401
Transcription
61
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
12
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
38
August, 2017
23
October, 2018
Available data
25
bam
25
fastq
8
tagAlign
7
bed narrowPeak
7
bigWig
6
bigBed narrowPeak
1
bed broadPeak
Organism
61
Homo sapiens
Biosample type
61
tissue
Organ
539
liver
214
brain
164
pancreas
136
connective tissue
134
heart
108
epithelium
102
vasculature
99
blood vessel
66
limb
61
adipose tissue
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
21
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
61
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
missing controlled_by
organ_slims!
skeleton
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
61 results
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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
12
omental fat pad
11
adipose tissue
2
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