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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
5
ChIP-seq
3
pCHi-C
2
Hi-C
2
total RNA-seq
Assay category
30
DNA accessibility
5
DNA binding
2
3D chromatin structure
2
Transcription
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
37
bam
35
bigWig
33
bed narrowPeak
33
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
5
tsv
2
bedpe bed3+
2
hic
Organism
42
Homo sapiens
Biosample type
34
tissue
8
primary cell
Organ
83
kidney
48
musculature of body
42
heart
32
brain
32
limb
26
epithelium
20
connective tissue
18
pancreas
18
ureter
11
vasculature
9
blood vessel
7
eye
5
liver
2
adipose tissue
2
artery
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
42
AMP
Genome assembly (visualization)
35
GRCh38
34
hg19
Lab
42
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
skeleton
BIOSAMPLE
ASSAY
42 results
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DNase-seq
ChIP-seq
pCHi-C
Hi-C
total RNA-seq
tissue
heart
18
heart left ventricle
3
1
1
1
heart right ventricle
1
1
1
1
coronary artery
2
right atrium auricular region
2
+ See 2 more…
primary cell
cardiac fibroblast
3
5
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