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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
3
MeRIP-seq
Assay category
80
DNA binding
Target of assay
83
control
9
transcription factor
3
histone
3
histone modification
3
nucleotide modification
2
RNA binding protein
2
broad histone mark
1
narrow histone mark
1
recombinant protein
Date released
56
November, 2017
9
October, 2019
4
August, 2021
3
February, 2021
3
January, 2019
3
November, 2018
3
November, 2020
2
November, 2019
Available data
76
bam
62
fastq
13
bigWig
4
tagAlign
Organism
83
Homo sapiens
Biosample type
187
tissue
83
cell line
37
in vitro differentiated cells
35
primary cell
1
stem cell
Organ
60
liver
11
pancreas
6
blood
6
bodily fluid
5
epithelium
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
83
AMP
Genome assembly (visualization)
13
hg19
Lab
76
AMP-T2D consortium
4
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
organ_slims!
skin of body
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
60
GM12878
6
Panc1
6
EndoC_BH1
2
3
smooth muscle cell of the coronary artery
2
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