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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
29
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
29
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
6
narrow histone mark
transcription factor
1
RNA binding protein
Date released
54
February, 2021
23
October, 2019
4
May, 2019
2
August, 2021
2
February, 2020
2
July, 2019
Available data
83
bam
74
bigWig
58
tsv
20
bed narrowPeak
20
bigBed narrowPeak
2
tagAlign
Organism
87
Homo sapiens
Biosample type
54
cell line
31
tissue
2
primary cell
Organ
754
pancreas
610
connective tissue
466
adipose tissue
424
liver
392
epithelium
299
heart
246
brain
181
kidney
169
vasculature
166
blood vessel
147
bone element
87
artery
78
limb
61
musculature of body
40
nerve
34
embryo
28
eye
19
vein
17
spleen
10
lung
9
blood
9
bodily fluid
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
87
AMP
Genome assembly (visualization)
74
GRCh38
74
hg19
Lab
87
AMP-T2D consortium
organ_slims!
skin of body
target.investigated_as!
transcription factor
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
87 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
2
tissue
tibial artery
1
23
coronary artery
1
4
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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