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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
ChIP-seq
Assay category
398
DNA binding
Target of assay
398
transcription factor
362
histone
362
histone modification
228
broad histone mark
134
narrow histone mark
86
RNA binding protein
81
recombinant protein
33
chromatin remodeller
5
other context
5
other post-translational modification
Date released
234
November, 2017
63
November, 2018
31
December, 2017
28
December, 2018
15
October, 2018
14
January, 2019
5
April, 2019
4
May, 2019
2
August, 2017
2
June, 2019
Available data
487
bigWig
476
bam
460
bed narrowPeak
450
fastq
398
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
19
bed bed3+
8
tagAlign
3
tar
Organism
398
Homo sapiens
Biosample type
328
cell line
65
tissue
5
primary cell
Organ
314
liver
51
blood
51
bodily fluid
10
pancreas
8
heart
epithelium
6
connective tissue
6
spleen
5
adipose tissue
5
vasculature
4
blood vessel
3
brain
2
kidney
1
artery
1
eye
Project
398
AMP
Genome assembly (visualization)
394
hg19
365
GRCh38
Lab
398
AMP-T2D consortium
Audit category:
28
inconsistent control
1
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
organ_slims!
skin of body
epithelium
BIOSAMPLE
ASSAY
398 results
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Clear Filters
ChIP-seq
cell line
HepG2
277
GM12878
51
tissue
liver
33
body of pancreas
9
spleen
6
heart left ventricle
5
omental fat pad
3
+ See 7 more…
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
cardiac fibroblast
1
cardiac muscle cell
1
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