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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
194
total RNA-seq
50
ChIP-seq
10
MeRIP-seq
1
pCHi-C
Assay category
194
Transcription
DNA accessibility
50
DNA binding
Target of assay
28
control
27
histone
27
histone modification
27
narrow histone mark
5
nucleotide modification
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
59
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
242
bam
219
bigWig
193
tsv
50
tagAlign
27
bed narrowPeak
Organism
255
Homo sapiens
Biosample type
197
tissue
51
primary cell
7
cell line
Organ
194
liver
10
pancreas
6
epithelium
4
connective tissue
Project
210
AMP
45
T1D
Genome assembly (visualization)
219
hg19
211
GRCh38
Lab
200
AMP-T2D consortium
45
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
10
inconsistent ontology term
organ_slims!
small intestine
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
255 results
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Clear Filters
total RNA-seq
ChIP-seq
MeRIP-seq
pCHi-C
tissue
liver
143
50
islet of Langerhans
4
primary cell
osteoblast
4
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 23 more…
cell line
EndoC_BH1
6
HepG2
1
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