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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
80
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
19
control
6
transcription factor
5
nucleotide modification
4
RNA binding protein
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
85
bam
70
bigWig
67
bed narrowPeak
65
bigBed narrowPeak
4
tsv
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
95
Homo sapiens
Biosample type
84
tissue
6
cell line
5
primary cell
Organ
57
heart
23
kidney
10
pancreas
6
epithelium
5
connective tissue
Project
95
AMP
Genome assembly (visualization)
70
hg19
69
GRCh38
Lab
85
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
organ_slims!
spinal cord
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
islet of Langerhans
4
cell line
EndoC_BH1
6
primary cell
osteoblast
4
1
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