Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
27
snATAC-seq
13
single cell RNA-seq
4
ATAC-seq
1
pCHi-C
Assay category
31
DNA accessibility
13
Transcription
Date released
189
February, 2023
176
May, 2022
162
August, 2021
129
August, 2017
129
February, 2021
122
May, 2021
64
October, 2019
59
September, 2020
57
May, 2020
47
September, 2023
40
May, 2024
26
July, 2019
19
April, 2020
16
January, 2021
16
March, 2020
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
December, 2019
1
November, 2018
1
September, 2018
Available data
bam
tsv
551
bigWig
89
txt
45
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
129
Homo sapiens
Biosample type
85
tissue
39
primary cell
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
4
connective tissue
2
liver
Project
90
AMP
39
HPAP
Genome assembly (visualization)
5
hg19
Lab
90
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
27
audit script error
organ_slims!
spinal cord
files.file_type!
bam
tsv
BIOSAMPLE
ASSAY
129 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
snATAC-seq
single cell RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
liver
1
primary cell
Langerhans cell
27
12
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
Download